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Oncology Code: 21229

ExoSeq® GI

ExoSeq® GI uses a whole exome sequencing platform to analyse 336 genes associated with gastrointestinal diseases, particularly the hereditary forms of colorectal, gastric and pancreatic cancer.

ExoSeq® GI
Sample
Blood (2 × 3 ml EDTA tubes)
Turnaround time
6 weeks
Method
Whole exome sequencing (NGS)
Ordering
Following physician assessment

Who is it for?

  • Colorectal cancer diagnosed before the age of 50, or families meeting the Amsterdam II criteria
  • More than 100 polyps (FAP) or 10–100 polyps (AFAP / MUTYH)
  • Diffuse gastric cancer with a family history of signet ring cell carcinoma (CDH1)
  • Pancreatic cancer at a young age or in more than one family member

Genes analysed

336 genes

A selection of the 336 genes is listed below as examples.

MLH1MSH2MSH6PMS2EPCAMAPCMUTYHSMAD4BMPR1ASTK11PTENCDH1TP53POLD1POLERNF43NTHL1AXIN2GREM1BARD1BRCA1BRCA2ATMPALB2CHEK2PRSS1PRSS2SPINK1CFTRCTRC

Technical details

Method
Whole exome sequencing (NGS), targeted gene panel analysis
Sample
Blood in EDTA tubes (2 × 3 ml)
Turnaround time
6 weeks
Output
Clinical report + FASTQ and VCF files

Included with your report

  • Report with clinical interpretation
  • Raw data (FASTQ) and variant file (VCF)
  • Recommendations for family testing

How does the process work?

  1. 1
    Leave your request

    Choose the test, or let your physician request it on your behalf. If you are not sure which test fits, we decide together.

  2. 2
    We call you

    Our team calls within 1 working day to confirm the request, the sample type (blood or tumour tissue) and your appointment time.

  3. 3
    Sample collection

    A blood sample is taken at Akasya Partner Clinics in a few minutes. For tissue tests, the pathology block is collected by courier.

  4. 4
    Report and review

    The report is ready in 1–6 weeks depending on the test (stated on each test page), sent to your physician and reviewed with our consultant physicians.

Last updated:

Your genes are ready to talk.

Send us your request; we will call you, answer your questions and find the day that suits you best, together.

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